species:   Pimic
pid:       PID1830
parent:    Pmic_miR-7
paralog:   
locus:     scaffold_106:26653-26727
matures:   ['UCCAGCAAGGGGGAAUGGGCU', 'CUCGUUCCCUUUGCUGGACG']
srr:       SRP140505
genome:    /Users/jax/+Genomes/Fungal_genomes/Pimic.Pismi1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRP140505.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRP140505.cram scaffold_106:26653-26727

0 out of bounds
3 alignments
3 proper strand
2 stranded perfect matches

                ********************************************               
AUUAAAAUUUGCCAAGCGUCCAGCAAGGGGGAAUGGGCUACUCGUUCCCUUUGCUGGACGCUUGGCGUCGCCCAC
..........((((((((((((((((((((.((((((...)))))))))))))))))))))))))).........
------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=0 c
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=0 c*
--------------------------------------UACUCGUUCCCUUUGCUGGA----------------- l=20 a=1 ma
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=0 ma*

---------------------AGCAAGGGGGAAUGGGCUAg---------------------------------- l=20 a=1 
--------------------------------------UACUCGUUCCCUUUGCUG------------------- l=18 a=1 
--------------------------------------UACUCGUUCCCUUUGCUGGA----------------- l=20 a=1 (ma)

mb-00011
ax-1011011
ku-01
ss-100111111100
fn-011
